Selected RNA databases
RNA structure analysis & visualization
- RNAComposer - automated RNA 3D structure modeling server
- RNAssess - a webserver for quality assessment of RNA 3D structures
- RNAlyzer - RNA 3D structure comparison framework
- RNApdbee - RNA secondary structure extraction from PDB files
- Mfold (prediction of RNA secondary structure)
- Bielefeld University Bioinformatics Server (BiBiServ)
- RNAView Secondary Structure Viewer
- PseudoViewer
- Vienna RNA Package
- Alignment of RNA Tertiary Structures (ARTS)
- 3DNA - Analysis, rebuilding, and visualization of 3D RNA & DNA structures
- Jmol (an open-source Java viewer for chemical structures in 3D)
- PyMOL (molecular visualization system)
- Jena Library of biological macromolecules
- The RNA World Website
- FASTR3D